Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl/propionyl-coa carboxylase subuit alpha | AO062_20245 | Not Available | Negative | 4379463 - 4381196 | 60541.3 |
| allophanate hydrolase | AO062_20250 | Not Available | Negative | 4381218 - 4382804 | 55136.2 |
| hypothetical protein | AO062_20255 | Not Available | Negative | 4382813 - 4383583 | 27214.4 |
| pyrrolidone-carboxylate peptidase 2 | AO062_20260 | Not Available | Negative | 4383619 - 4384290 | 23811.8 |
| permease | AO062_20265 | Not Available | Negative | 4384301 - 4385257 | 33566.5 |
| hypothetical protein | AO062_20270 | Not Available | Negative | 4385263 - 4386003 | 26443.2 |
| gntr family transcriptional regulator | AO062_20275 | Not Available | Positive | 4386288 - 4386983 | 25669.2 |
| lysine transporter lyse | AO062_20280 | Not Available | Positive | 4387075 - 4387701 | 22084.7 |
| serine dehydratase | AO062_20285 | Not Available | Negative | 4387721 - 4389139 | 49389.6 |
| abc transporter substrate-binding protein | AO062_20290 | Not Available | Negative | 4389136 - 4390116 | 34905.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
