Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_20140 | Not Available | Negative | 4357514 - 4358014 | 19094.5 |
| hypothetical protein | AO062_20145 | Not Available | Negative | 4358088 - 4358945 | 28822.4 |
| abc transporter substrate-binding protein | AO062_20150 | Not Available | Negative | 4358942 - 4359916 | 34437.7 |
| carboxymuconolactone decarboxylase | AO062_20155 | Not Available | Negative | 4359933 - 4360505 | 20941.4 |
| laci family transcriptional regulator | AO062_20160 | Not Available | Negative | 4360512 - 4361504 | 35370.5 |
| oxidoreductase | AO062_20165 | Not Available | Negative | 4361513 - 4362370 | 29746.6 |
| laci family transcriptional regulator | AO062_20170 | Not Available | Positive | 4362503 - 4363522 | 36308.9 |
| 2-nitropropane dioxygenase | AO062_20175 | Not Available | Negative | 4363529 - 4364479 | 33152.8 |
| nitronate monooxygenase | AO062_20180 | Not Available | Negative | 4364476 - 4365480 | 34862.8 |
| alpha-methylacyl-coa racemase | AO062_20185 | Not Available | Negative | 4365477 - 4366583 | 39495.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
