Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | AO062_19970 | Not Available | Positive | 4313295 - 4314494 | 42744.5 |
| abc transporter permease | AO062_19975 | Not Available | Positive | 4314551 - 4315474 | 31627.0 |
| abc transporter atp-binding protein | AO062_19980 | Not Available | Positive | 4315471 - 4317252 | 62978.9 |
| abc transporter atp-binding protein | AO062_19985 | Not Available | Positive | 4317273 - 4317983 | 25413.1 |
| mbl fold metallo-hydrolase | AO062_19990 | Not Available | Positive | 4318012 - 4318980 | 35982.7 |
| hypothetical protein | AO062_19995 | Not Available | Positive | 4319024 - 4319905 | 30646.7 |
| nadh:flavin oxidoreductase / nadh oxidase | AO062_20000 | Not Available | Positive | 4319915 - 4321099 | 42145.1 |
| ethyl tert-butyl ether degradation protein ethd | AO062_20005 | Not Available | Positive | 4321096 - 4321812 | 26843.8 |
| hypothetical protein | AO062_20015 | Not Available | Positive | 4322868 - 4323893 | 34398.4 |
| hypothetical protein | AO062_20025 | Not Available | Positive | 4326259 - 4326597 | 12654.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
