Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-carboxyhexanoate--coa ligase | AO062_19260 | Not Available | Negative | 4152729 - 4154840 | 72547.2 |
| porin | AO062_19265 | Not Available | Negative | 4154864 - 4155925 | 37253.9 |
| hypothetical protein | AO062_19270 | Not Available | Positive | 4156129 - 4156821 | 25717.6 |
| bacteriocin-protection protein | AO062_19275 | Not Available | Negative | 4156847 - 4157419 | 21263.5 |
| phosphatidate cytidylyltransferase | AO062_19280 | Not Available | Negative | 4157458 - 4158414 | 35291.9 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | AO062_19285 | Not Available | Negative | 4158411 - 4159076 | 24017.2 |
| hypothetical protein | AO062_19290 | Not Available | Negative | 4159142 - 4159582 | 15520.4 |
| phosphatase | AO062_19295 | Not Available | Negative | 4159575 - 4160915 | 50054.4 |
| hypothetical protein | AO062_19300 | Not Available | Negative | 4160912 - 4162678 | 65144.9 |
| cdp-alcohol phosphatidyltransferase | AO062_19305 | Not Available | Negative | 4162717 - 4163331 | 21708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
