Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | AO062_19010 | Not Available | Positive | 4096983 - 4102733 | 208400.0 |
| ornithine cyclodeaminase | AO062_19015 | Not Available | Positive | 4102850 - 4103899 | 38157.8 |
| acetylpolyamine aminohydrolase | AO062_19020 | Not Available | Positive | 4103934 - 4104980 | 37548.3 |
| hypothetical protein | AO062_19025 | Not Available | Positive | 4105086 - 4106054 | 34335.7 |
| hypothetical protein | AO062_19030 | Not Available | Positive | 4106281 - 4107477 | 41545.8 |
| had family hydrolase | AO062_19035 | Not Available | Negative | 4107608 - 4108432 | 29525.9 |
| abc transporter | AO062_19040 | Not Available | Positive | 4108528 - 4109523 | 36732.4 |
| abc transporter permease | AO062_19045 | Not Available | Positive | 4109532 - 4110374 | 29538.7 |
| hypothetical protein | AO062_19050 | Not Available | Positive | 4110517 - 4111650 | 41593.5 |
| hypothetical protein | AO062_19055 | Not Available | Positive | 4111647 - 4112687 | 39067.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
