Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | AO062_18805 | Not Available | Negative | 4054734 - 4055837 | 39492.4 |
| phosphate abc transporter permease | AO062_18810 | Not Available | Negative | 4055888 - 4056706 | 29284.7 |
| phosphonate abc transporter atp-binding protein | AO062_18815 | Not Available | Negative | 4056703 - 4057560 | 30897.4 |
| phosphonate abc transporter substrate-binding protein | AO062_18820 | Not Available | Negative | 4057557 - 4058420 | 31073.6 |
| lysr family transcriptional regulator | AO062_18825 | Not Available | Positive | 4058671 - 4059555 | 33020.1 |
| recombinase xerd | AO062_18830 | Not Available | Negative | 4059570 - 4060484 | 33999.4 |
| abc transporter substrate-binding protein | AO062_18835 | Not Available | Negative | 4060552 - 4061526 | 34002.2 |
| transporter | AO062_18840 | Not Available | Positive | 4061643 - 4062560 | 32371.5 |
| hypothetical protein | AO062_18850 | Not Available | Positive | 4063373 - 4063804 | 16218.0 |
| thiamine biosynthesis protein thic | AO062_18855 | Not Available | Positive | 4064029 - 4065912 | 69648.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
