Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_18605 | Not Available | Negative | 4017851 - 4018045 | 7254.87 |
| dna topoisomerase iv | AO062_18610 | Not Available | Negative | 4018048 - 4020444 | 86282.5 |
| lytic transglycosylase | AO062_18615 | Not Available | Negative | 4020532 - 4021467 | 33115.7 |
| dna topoisomerase iv | AO062_18620 | Not Available | Negative | 4021501 - 4023489 | 71955.7 |
| lysr family transcriptional regulator | AO062_18625 | Not Available | Negative | 4023564 - 4024475 | 32881.7 |
| serine hydrolase | AO062_18630 | Not Available | Positive | 4024566 - 4025762 | 42005.1 |
| mfs transporter | AO062_18635 | Not Available | Positive | 4025755 - 4026951 | 40345.2 |
| mfs transporter | AO062_18640 | Not Available | Positive | 4027083 - 4028309 | 43148.6 |
| sam-dependent methyltransferase | AO062_18645 | Not Available | Positive | 4028542 - 4029114 | 20095.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AO062_18650 | Not Available | Positive | 4029234 - 4030082 | 30361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
