Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionic acid transporter | AO062_17895 | Not Available | Negative | 3851644 - 3853065 | 51267.9 |
| 4-hydroxyphenylpyruvate dioxygenase | AO062_17900 | Not Available | Negative | 3853129 - 3855027 | 69014.0 |
| 3-oxoadipate enol-lactonase | AO062_17905 | Not Available | Negative | 3855169 - 3855945 | 27393.8 |
| mfs transporter | AO062_17910 | Not Available | Negative | 3855942 - 3857183 | 43591.2 |
| carboxymuconolactone decarboxylase | AO062_17915 | Not Available | Negative | 3857180 - 3857623 | 16214.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | AO062_17920 | Not Available | Negative | 3857620 - 3858834 | 42493.3 |
| shikimate dehydrogenase | AO062_17925 | Not Available | Negative | 3858851 - 3859684 | 29457.8 |
| shikimate dehydrogenase | AO062_17930 | Not Available | Negative | 3859718 - 3860641 | 32849.7 |
| 4-hydroxyphenylpyruvate dioxygenase | AO062_17935 | Not Available | Positive | 3860841 - 3861635 | 29106.1 |
| hypothetical protein | AO062_17940 | Not Available | Negative | 3861727 - 3868704 | 225880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
