Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_17695 | Not Available | Negative | 3813201 - 3814262 | 38870.4 |
| nad-dependent epimerase | AO062_17700 | Not Available | Positive | 3814328 - 3815344 | 35459.5 |
| c4-dicarboxylate abc transporter substrate-binding protein | AO062_17705 | Not Available | Positive | 3815400 - 3816374 | 35548.8 |
| c4-dicarboxylate abc transporter permease | AO062_17710 | Not Available | Positive | 3816455 - 3816967 | 19272.9 |
| c4-dicarboxylate abc transporter | AO062_17715 | Not Available | Positive | 3816978 - 3818270 | 45960.4 |
| arac family transcriptional regulator | AO062_17720 | Not Available | Negative | 3818308 - 3819087 | 27916.2 |
| mfs transporter | AO062_17725 | Not Available | Positive | 3819197 - 3820387 | 40309.0 |
| hypothetical protein | AO062_17730 | Not Available | Positive | 3820528 - 3821010 | 16904.0 |
| hypothetical protein | AO062_17735 | Not Available | Positive | 3821107 - 3821643 | 19945.1 |
| glycine cleavage system protein t | AO062_17740 | Not Available | Positive | 3821930 - 3823102 | 40873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
