Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_17440 | Not Available | Positive | 3758943 - 3759851 | 33519.4 |
| hypothetical protein | AO062_17445 | Not Available | Negative | 3759865 - 3760932 | 38360.4 |
| carnitine dehydratase | AO062_17450 | Not Available | Negative | 3760945 - 3762342 | 49033.4 |
| succinyl-coa--3-ketoacid-coa transferase | AO062_17455 | Not Available | Negative | 3762448 - 3763086 | 22410.5 |
| succinyl-coa--3-ketoacid-coa transferase | AO062_17460 | Not Available | Negative | 3763088 - 3763891 | 27906.6 |
| luxr family transcriptional regulator | AO062_17465 | Not Available | Positive | 3763985 - 3764551 | 20756.1 |
| hypothetical protein | AO062_17470 | Not Available | Negative | 3764690 - 3765151 | 17152.9 |
| abc transporter substrate-binding protein | AO062_17475 | Not Available | Negative | 3765519 - 3766484 | 34120.0 |
| lactoylglutathione lyase | AO062_17480 | Not Available | Negative | 3766532 - 3766912 | 14021.0 |
| hydroxymethylglutaryl-coa lyase | AO062_17485 | Not Available | Negative | 3766909 - 3767892 | 35197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
