Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_16630 | Not Available | Negative | 3573726 - 3574742 | 36931.8 |
| hypothetical protein | AO062_16635 | Not Available | Negative | 3574754 - 3575368 | 22999.8 |
| xre family transcriptional regulator | AO062_16640 | Not Available | Positive | 3575480 - 3575770 | 10689.9 |
| hypothetical protein | AO062_16645 | Not Available | Negative | 3575882 - 3576331 | 16700.9 |
| hypothetical protein | AO062_16650 | Not Available | Positive | 3576456 - 3576638 | 5930.54 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | AO062_16655 | Not Available | Positive | 3577136 - 3578290 | 40845.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | AO062_16660 | Not Available | Positive | 3578297 - 3578758 | 16031.2 |
| antitermination protein nusb | AO062_16665 | Not Available | Positive | 3578755 - 3579285 | 19448.0 |
| aminotransferase | AO062_16670 | Not Available | Positive | 3579282 - 3580469 | 43395.8 |
| 4-hydroxybenzoyl-coa thioesterase | AO062_16675 | Not Available | Positive | 3580466 - 3580924 | 17029.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
