Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | AO062_16580 | Not Available | Positive | 3559159 - 3560403 | 44767.8 |
| nrdr family transcriptional regulator | AO062_16585 | Not Available | Positive | 3560437 - 3560880 | 17123.7 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | AO062_16590 | Not Available | Positive | 3560909 - 3562039 | 39810.7 |
| riboflavin synthase subunit alpha | AO062_16595 | Not Available | Positive | 3562126 - 3562758 | 21837.0 |
| hypothetical protein | AO062_16600 | Not Available | Negative | 3563360 - 3564025 | 24983.7 |
| helicase snf2 | AO062_16605 | Not Available | Negative | 3564091 - 3567681 | 132025.0 |
| hypothetical protein | AO062_16610 | Not Available | Negative | 3567859 - 3569526 | 62626.7 |
| cell envelope biogenesis protein ompa | AO062_16615 | Not Available | Negative | 3569523 - 3570245 | 26784.4 |
| hypothetical protein | AO062_16620 | Not Available | Negative | 3570252 - 3572261 | 71690.9 |
| integrase | AO062_16625 | Not Available | Negative | 3572667 - 3573446 | 28447.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
