Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteinyl-trna synthetase | AO062_16530 | Not Available | Negative | 3544914 - 3546290 | 50676.3 |
| hypothetical protein | AO062_16535 | Not Available | Positive | 3546487 - 3547077 | 21372.5 |
| peptidylprolyl isomerase | AO062_16540 | Not Available | Positive | 3547223 - 3547771 | 19223.9 |
| cyclophilin | AO062_16545 | Not Available | Positive | 3547799 - 3548311 | 18334.8 |
| udp-2,3-diacylglucosamine hydrolase | AO062_16550 | Not Available | Positive | 3548337 - 3549113 | 28556.9 |
| hypothetical protein | AO062_16555 | Not Available | Positive | 3549129 - 3549920 | 29219.8 |
| gyd family protein | AO062_16560 | Not Available | Positive | 3550152 - 3550445 | 10697.1 |
| hypothetical protein | AO062_16565 | Not Available | Negative | 3550518 - 3553361 | 99998.3 |
| hypothetical protein | AO062_16570 | Not Available | Negative | 3553550 - 3557371 | 134822.0 |
| lytic transglycosylase | AO062_16575 | Not Available | Positive | 3558084 - 3558944 | 30310.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
