Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | AO062_16150 | Not Available | Positive | 3470164 - 3470976 | 27993.6 |
| hypothetical protein | AO062_16155 | Not Available | Positive | 3470993 - 3471781 | 29072.8 |
| 5'-nucleotidase | AO062_16160 | Not Available | Positive | 3471871 - 3474066 | 75124.5 |
| mfs transporter | AO062_16165 | Not Available | Negative | 3474081 - 3475385 | 45711.4 |
| hypothetical protein | AO062_16170 | Not Available | Negative | 3475416 - 3476054 | 23449.3 |
| dna-binding protein | AO062_16190 | Not Available | Negative | 3476542 - 3478983 | 89202.5 |
| atp-dependent clp protease atp-binding subunit clpx | AO062_16195 | Not Available | Negative | 3478999 - 3480267 | 46397.1 |
| clp protease clpp | AO062_16200 | Not Available | Negative | 3480378 - 3480986 | 22258.8 |
| trigger factor | AO062_16205 | Not Available | Negative | 3481110 - 3482423 | 48714.9 |
| hypothetical protein | AO062_16210 | Not Available | Positive | 3482691 - 3483668 | 33932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
