Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter mfp subunit | AO062_15900 | Not Available | Negative | 3418956 - 3420209 | 44279.8 |
| alpha/beta hydrolase | AO062_15905 | Not Available | Negative | 3420365 - 3421246 | 30455.1 |
| lysr family transcriptional regulator | AO062_15910 | Not Available | Positive | 3421428 - 3422342 | 34046.7 |
| peroxiredoxin | AO062_15915 | Not Available | Negative | 3422411 - 3422875 | 17328.5 |
| hypothetical protein | AO062_15920 | Not Available | Negative | 3422911 - 3423639 | 25031.8 |
| murein hydrolase transporter lrga | AO062_15925 | Not Available | Negative | 3423636 - 3423989 | 12775.3 |
| aminotransferase | AO062_15930 | Not Available | Negative | 3424044 - 3425060 | 35992.4 |
| cobalamin biosynthesis protein cobd | AO062_15935 | Not Available | Negative | 3425057 - 3426037 | 35143.9 |
| cobalt chelatase | AO062_15940 | Not Available | Negative | 3426056 - 3430045 | 143231.0 |
| hypothetical protein | AO062_15945 | Not Available | Negative | 3430042 - 3430395 | 12676.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
