Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | AO062_15790 | Not Available | Positive | 3395408 - 3396178 | 26904.2 |
| hypothetical protein | AO062_15795 | Not Available | Negative | 3396247 - 3396954 | 24575.3 |
| chemotaxis protein chey | AO062_15800 | Not Available | Positive | 3397542 - 3398273 | 27176.9 |
| histidine kinase | AO062_15805 | Not Available | Positive | 3398351 - 3399772 | 52109.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AO062_15810 | Not Available | Negative | 3399782 - 3400273 | 17085.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AO062_15815 | Not Available | Negative | 3400270 - 3400983 | 25146.4 |
| transcription-repair coupling factor | AO062_15820 | Not Available | Positive | 3401102 - 3404584 | 129142.0 |
| phosphoserine phosphatase | AO062_15825 | Not Available | Positive | 3404581 - 3405294 | 25537.1 |
| lactate dehydrogenase | AO062_15830 | Not Available | Positive | 3405291 - 3406355 | 37578.3 |
| hypothetical protein | AO062_15835 | Not Available | Negative | 3406362 - 3406688 | 12458.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
