Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_15675 | Not Available | Negative | 3371028 - 3373460 | 89806.9 |
| rip metalloprotease rsep | AO062_15680 | Not Available | Negative | 3373499 - 3374872 | 49303.4 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | AO062_15685 | Not Available | Negative | 3374897 - 3376084 | 41770.4 |
| phosphatidate cytidylyltransferase | AO062_15690 | Not Available | Negative | 3376081 - 3376926 | 30427.5 |
| udp diphosphate synthase | AO062_15695 | Not Available | Negative | 3376951 - 3377676 | 26420.6 |
| ribosome-recycling factor | AO062_15700 | Not Available | Negative | 3377685 - 3378245 | 20527.7 |
| uridylate kinase | AO062_15705 | Not Available | Negative | 3378257 - 3378979 | 25421.1 |
| elongation factor ts | AO062_15710 | Not Available | Negative | 3379079 - 3380002 | 32537.1 |
| 30s ribosomal protein s2 | AO062_15715 | Not Available | Negative | 3380084 - 3380839 | 27371.1 |
| amidase | AO062_15720 | Not Available | Positive | 3381045 - 3382367 | 45530.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
