Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | AO062_15625 | Not Available | Negative | 3360092 - 3360961 | 32668.0 |
| carbamoyl phosphate synthase large subunit | AO062_15630 | Not Available | Negative | 3360974 - 3364222 | 117520.0 |
| carbamoyl phosphate synthase small subunit | AO062_15635 | Not Available | Negative | 3364215 - 3365399 | 42108.7 |
| rrna methyltransferase | AO062_15640 | Not Available | Negative | 3365542 - 3366327 | 27414.0 |
| ribonuclease hii | AO062_15645 | Not Available | Negative | 3366335 - 3367066 | 25972.6 |
| lipid-a-disaccharide synthase | AO062_15650 | Not Available | Negative | 3367038 - 3368156 | 40589.7 |
| udp-n-acetylglucosamine acyltransferase | AO062_15655 | Not Available | Negative | 3368197 - 3368985 | 28004.6 |
| 3-hydroxyacyl-acp dehydratase | AO062_15660 | Not Available | Negative | 3369011 - 3369466 | 16950.9 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | AO062_15665 | Not Available | Negative | 3369490 - 3370467 | 34253.2 |
| hypothetical protein | AO062_15670 | Not Available | Negative | 3370482 - 3371027 | 20364.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
