Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | AO062_15475 | Not Available | Positive | 3328874 - 3330343 | 52277.4 |
| indolepyruvate ferredoxin oxidoreductase | AO062_15480 | Not Available | Negative | 3330369 - 3333914 | 128279.0 |
| lysr family transcriptional regulator | AO062_15485 | Not Available | Positive | 3334179 - 3335066 | 33074.1 |
| hypothetical protein | AO062_15490 | Not Available | Positive | 3335506 - 3335784 | 10127.9 |
| exodeoxyribonuclease vii | AO062_15495 | Not Available | Negative | 3336355 - 3337668 | 46884.5 |
| flagellar motor protein mota | AO062_15500 | Not Available | Positive | 3337981 - 3338613 | 22431.7 |
| biopolymer transporter exbd | AO062_15505 | Not Available | Positive | 3338759 - 3339184 | 15056.2 |
| tetraacyldisaccharide 4'-kinase | AO062_15510 | Not Available | Positive | 3339185 - 3340180 | 36054.5 |
| tetraacyldisaccharide 4'-kinase | AO062_15515 | Not Available | Positive | 3340161 - 3340343 | 6697.13 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | AO062_15520 | Not Available | Positive | 3340340 - 3341113 | 26888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
