Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | AO062_15425 | Not Available | Negative | 3316915 - 3318246 | 46156.1 |
| fructose transporter | AO062_15430 | Not Available | Positive | 3318483 - 3319130 | 23313.9 |
| hypothetical protein | AO062_15435 | Not Available | Negative | 3319143 - 3320045 | 33763.2 |
| sugar abc transporter substrate-binding protein | AO062_15440 | Not Available | Negative | 3320087 - 3321391 | 47088.4 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | AO062_15445 | Not Available | Negative | 3321589 - 3322809 | 42841.6 |
| 2-oxoisovalerate dehydrogenase | AO062_15450 | Not Available | Negative | 3322810 - 3323823 | 36783.0 |
| 2-oxoisovalerate dehydrogenase | AO062_15455 | Not Available | Negative | 3323829 - 3325070 | 45039.4 |
| transporter | AO062_15460 | Not Available | Positive | 3325278 - 3327068 | 62488.1 |
| hypothetical protein | AO062_15465 | Not Available | Positive | 3327166 - 3328140 | 35901.8 |
| hypothetical protein | AO062_15470 | Not Available | Negative | 3328109 - 3328723 | 21731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
