Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_15375 | Not Available | Positive | 3308020 - 3308439 | 15240.4 |
| hypothetical protein | AO062_15380 | Not Available | Positive | 3308522 - 3308986 | 17048.2 |
| urease accessory protein ured | AO062_15385 | Not Available | Negative | 3309007 - 3309837 | 30319.4 |
| cmp deaminase | AO062_15390 | Not Available | Negative | 3309847 - 3310374 | 18818.1 |
| abc transporter permease | AO062_15395 | Not Available | Negative | 3310371 - 3311399 | 37063.2 |
| rieske (2fe-2s) protein | AO062_15400 | Not Available | Positive | 3311751 - 3312824 | 40739.4 |
| carotenoid oxygenase | AO062_15405 | Not Available | Negative | 3312837 - 3314336 | 54382.1 |
| hypothetical protein | AO062_15410 | Not Available | Negative | 3314349 - 3314786 | 15139.0 |
| hypothetical protein | AO062_15415 | Not Available | Negative | 3314931 - 3316040 | 39780.7 |
| gntr family transcriptional regulator | AO062_15420 | Not Available | Negative | 3316202 - 3316909 | 25455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
