Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | AO062_01500 | Not Available | Negative | 313745 - 317608 | 144019.0 |
| peptidase m41 | AO062_01505 | Not Available | Positive | 318061 - 320082 | 74289.4 |
| amino acid acetyltransferase | AO062_01510 | Not Available | Positive | 320126 - 321472 | 49218.3 |
| hypothetical protein | AO062_01520 | Not Available | Positive | 322269 - 323264 | 35334.8 |
| succinyldiaminopimelate transaminase | AO062_01525 | Not Available | Positive | 323323 - 324534 | 43800.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AO062_01530 | Not Available | Positive | 324584 - 325417 | 29582.3 |
| twitching motility protein pilt | AO062_01535 | Not Available | Positive | 325506 - 326654 | 42038.7 |
| succinyl-diaminopimelate desuccinylase | AO062_01540 | Not Available | Positive | 326679 - 327866 | 41967.7 |
| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific | AO062_01545 | Not Available | Positive | 327863 - 328744 | 31464.4 |
| abc transporter | AO062_01550 | Not Available | Positive | 328886 - 330889 | 73192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
