Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin d | AO062_15075 | Not Available | Negative | 3244594 - 3245820 | 42501.0 |
| hypothetical protein | AO062_15080 | Not Available | Negative | 3246027 - 3246977 | 34778.0 |
| n-acyl-l-amino acid amidohydrolase | AO062_15085 | Not Available | Positive | 3247160 - 3248521 | 47895.7 |
| hypothetical protein | AO062_15090 | Not Available | Negative | 3248550 - 3248951 | 14268.2 |
| histidine kinase | AO062_15095 | Not Available | Positive | 3249150 - 3250565 | 51961.3 |
| hypothetical protein | AO062_15100 | Not Available | Positive | 3250868 - 3251863 | 35812.5 |
| luxr family transcriptional regulator | AO062_15105 | Not Available | Negative | 3251954 - 3252556 | 21836.4 |
| tryptophan--trna ligase | AO062_15110 | Not Available | Negative | 3252633 - 3253964 | 48307.5 |
| peptidase m50 | AO062_15115 | Not Available | Negative | 3253982 - 3254653 | 24457.9 |
| translation factor sua5 | AO062_15120 | Not Available | Negative | 3254697 - 3255332 | 23216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
