Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | AO062_14620 | Not Available | Negative | 3149102 - 3149767 | 24110.1 |
| hypothetical protein | AO062_14625 | Not Available | Negative | 3149767 - 3150444 | 24527.9 |
| peptidylprolyl isomerase | AO062_14630 | Not Available | Positive | 3150552 - 3150995 | 15672.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AO062_14635 | Not Available | Positive | 3150992 - 3151960 | 34993.9 |
| threonine dehydratase | AO062_14640 | Not Available | Positive | 3151957 - 3152922 | 33465.5 |
| seryl-trna synthetase | AO062_14645 | Not Available | Positive | 3152986 - 3154317 | 48245.7 |
| hypothetical protein | AO062_14655 | Not Available | Positive | 3154609 - 3155766 | 42642.8 |
| hypothetical protein | AO062_14660 | Not Available | Negative | 3155792 - 3156376 | 20556.8 |
| hypothetical protein | AO062_14665 | Not Available | Positive | 3156482 - 3157309 | 31121.1 |
| methyltransferase | AO062_14670 | Not Available | Positive | 3159625 - 3161292 | 60916.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
