Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | AO062_14570 | Not Available | Positive | 3138821 - 3139489 | 23430.2 |
| iron oxidase | AO062_14575 | Not Available | Negative | 3139513 - 3140514 | 36856.9 |
| amino acid abc transporter atp-binding protein | AO062_14580 | Not Available | Negative | 3140511 - 3141254 | 27591.3 |
| amino acid abc transporter permease | AO062_14585 | Not Available | Negative | 3141251 - 3141961 | 26128.1 |
| abc transporter permease | AO062_14590 | Not Available | Negative | 3141975 - 3142670 | 25593.7 |
| amino acid abc transporter substrate-binding protein | AO062_14595 | Not Available | Negative | 3142792 - 3143619 | 29541.7 |
| trans-2-enoyl-coa reductase | AO062_14600 | Not Available | Positive | 3143810 - 3145006 | 42606.8 |
| globin | AO062_14605 | Not Available | Positive | 3145198 - 3145617 | 15969.1 |
| ferredoxin reductase | AO062_14610 | Not Available | Positive | 3145649 - 3146872 | 42653.2 |
| 2', 3'-cyclic nucleotide 2'-phosphodiesterase | AO062_14615 | Not Available | Positive | 3146972 - 3149077 | 74104.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
