Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO062_14470 | Not Available | Positive | 3118721 - 3121237 | 89021.6 |
| hypothetical protein | AO062_14475 | Not Available | Positive | 3121344 - 3122807 | 53411.3 |
| plasmid stabilization protein | AO062_14480 | Not Available | Negative | 3122847 - 3123170 | 12179.0 |
| prevent-host-death protein | AO062_14485 | Not Available | Negative | 3123167 - 3123439 | 10007.8 |
| lysr family transcriptional regulator | AO062_14490 | Not Available | Negative | 3123483 - 3124385 | 32985.9 |
| mfs transporter | AO062_14495 | Not Available | Positive | 3124574 - 3126037 | 49191.2 |
| transcriptional regulator | AO062_14500 | Not Available | Negative | 3126057 - 3126956 | 32400.1 |
| 3-ketoacyl-acp reductase | AO062_14505 | Not Available | Positive | 3127083 - 3127838 | 25864.8 |
| hypothetical protein | AO062_14510 | Not Available | Positive | 3127875 - 3128375 | 17198.6 |
| oxidoreductase | AO062_14515 | Not Available | Positive | 3128426 - 3129319 | 31296.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
