Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stomatin 2 | AO062_01395 | Not Available | Positive | 291361 - 292290 | 33620.6 |
| histidine kinase | AO062_01405 | Not Available | Positive | 292927 - 295572 | 94134.8 |
| luxr family transcriptional regulator | AO062_01410 | Not Available | Positive | 295851 - 296558 | 25589.6 |
| luxr family transcriptional regulator | AO062_01415 | Not Available | Negative | 296572 - 297249 | 24346.4 |
| hypothetical protein | AO062_01420 | Not Available | Negative | 297370 - 297783 | 14105.9 |
| hypothetical protein | AO062_01425 | Not Available | Positive | 298479 - 301511 | 107303.0 |
| hypothetical protein | AO062_01430 | Not Available | Negative | 301530 - 302762 | 44329.5 |
| hypothetical protein | AO062_01435 | Not Available | Positive | 302991 - 303356 | 13155.3 |
| chemotaxis protein chey | AO062_01440 | Not Available | Positive | 303460 - 303849 | 14040.8 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_01445 | Not Available | Negative | 303952 - 305157 | 41596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
