Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin | AO062_14220 | Not Available | Positive | 3071624 - 3071884 | 9496.67 |
| protein-export protein secb | AO062_14225 | Not Available | Positive | 3072013 - 3072477 | 16872.2 |
| glycerol-3-phosphate dehydrogenase | AO062_14230 | Not Available | Positive | 3072506 - 3073546 | 35202.5 |
| nicotinate-nucleotide pyrophosphorylase | AO062_14235 | Not Available | Positive | 3073570 - 3074448 | 30802.1 |
| quinolinate synthetase | AO062_14240 | Not Available | Positive | 3074455 - 3075570 | 39770.6 |
| 6-pyruvoyl tetrahydrobiopterin synthase | AO062_14245 | Not Available | Negative | 3075578 - 3075940 | 13866.6 |
| 7-carboxy-7-deazaguanine synthase | AO062_14250 | Not Available | Negative | 3075982 - 3076620 | 23176.8 |
| pantoate--beta-alanine ligase | AO062_14255 | Not Available | Negative | 3076617 - 3077459 | 31039.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AO062_14260 | Not Available | Negative | 3077479 - 3078372 | 31054.8 |
| l-aspartate oxidase | AO062_14265 | Not Available | Negative | 3078471 - 3080054 | 57204.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
