Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | AO062_13970 | Not Available | Positive | 3021160 - 3022905 | 63779.7 |
| lytic transglycosylase | AO062_13975 | Not Available | Positive | 3022902 - 3023558 | 24212.2 |
| hypothetical protein | AO062_13980 | Not Available | Negative | 3023575 - 3024894 | 48671.3 |
| glutaredoxin | AO062_13985 | Not Available | Negative | 3024987 - 3025316 | 11865.3 |
| sam-dependent methyltransferase | AO062_13990 | Not Available | Negative | 3025349 - 3026206 | 30174.8 |
| peptide chain release factor 1 | AO062_13995 | Not Available | Negative | 3026206 - 3027294 | 40514.9 |
| glutamyl-trna reductase | AO062_14000 | Not Available | Negative | 3027400 - 3028674 | 45891.3 |
| hypothetical protein | AO062_14005 | Not Available | Positive | 3028786 - 3029064 | 9848.26 |
| gcn5 family acetyltransferase | AO062_14010 | Not Available | Negative | 3029072 - 3029587 | 18401.8 |
| abc transporter atp-binding protein | AO062_14015 | Not Available | Negative | 3029587 - 3030381 | 29117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
