Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase a24 | AO062_13915 | Not Available | Negative | 3011455 - 3012420 | 34290.6 |
| type ii secretion system protein f | AO062_13920 | Not Available | Negative | 3012420 - 3013649 | 44754.1 |
| general secretion pathway protein gspe | AO062_13925 | Not Available | Negative | 3013674 - 3015407 | 62572.5 |
| octaprenyl diphosphate synthase | AO062_13935 | Not Available | Negative | 3015652 - 3016644 | 35169.2 |
| 50s ribosomal protein l21 | AO062_13940 | Not Available | Positive | 3016827 - 3017138 | 11280.8 |
| 50s ribosomal protein l27 | AO062_13945 | Not Available | Positive | 3017151 - 3017411 | 8933.88 |
| gtpase cgta | AO062_13950 | Not Available | Positive | 3017484 - 3018560 | 38795.7 |
| gamma-glutamyl kinase | AO062_13955 | Not Available | Positive | 3018641 - 3019780 | 40292.5 |
| hypothetical protein | AO062_13960 | Not Available | Negative | 3019815 - 3020342 | 19197.8 |
| rna pyrophosphohydrolase | AO062_13965 | Not Available | Negative | 3020356 - 3021024 | 26230.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
