Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation protein rimp | AO062_01345 | Not Available | Negative | 279048 - 279677 | 22698.0 |
| mfs transporter | AO062_01350 | Not Available | Negative | 279865 - 281073 | 41003.8 |
| microcin abc transporter atp-binding protein | AO062_01355 | Not Available | Negative | 281094 - 282734 | 58883.6 |
| peptide abc transporter permease | AO062_01360 | Not Available | Negative | 282734 - 283777 | 38462.1 |
| microcin abc transporter permease | AO062_01365 | Not Available | Negative | 283770 - 284783 | 37804.0 |
| oligopeptide abc transporter periplasmic substrate-binding protein | AO062_01370 | Not Available | Negative | 284800 - 286632 | 68703.9 |
| enoyl-acp reductase | AO062_01375 | Not Available | Positive | 286670 - 287452 | 27520.9 |
| dna ligase | AO062_01380 | Not Available | Positive | 287479 - 288327 | 31135.7 |
| lysine decarboxylase | AO062_01385 | Not Available | Negative | 288373 - 290670 | 86218.9 |
| hypothetical protein | AO062_01390 | Not Available | Positive | 290887 - 291312 | 15020.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
