Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AO062_13665 | Not Available | Negative | 2957349 - 2958386 | 37298.7 |
| atpase | AO062_13670 | Not Available | Negative | 2958383 - 2959378 | 37102.6 |
| atpase | AO062_13675 | Not Available | Negative | 2959359 - 2960384 | 37398.5 |
| peptidase s1 | AO062_13680 | Not Available | Negative | 2960405 - 2961403 | 33887.7 |
| dnaase | AO062_13685 | Not Available | Positive | 2961492 - 2962352 | 30939.1 |
| hypothetical protein | AO062_13690 | Not Available | Positive | 2962483 - 2962968 | 16391.2 |
| dna-deoxyinosine glycosylase | AO062_13695 | Not Available | Positive | 2963074 - 2963616 | 19643.5 |
| spermidine synthase | AO062_13700 | Not Available | Positive | 2963616 - 2964392 | 28911.9 |
| type ii secretion system protein e | AO062_13705 | Not Available | Positive | 2964411 - 2966201 | 65780.9 |
| hypothetical protein | AO062_13710 | Not Available | Positive | 2966419 - 2966904 | 17061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
