Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein | AO062_13615 | Not Available | Negative | 2949406 - 2950491 | 39624.4 |
| phenylacetate-coa oxygenase | AO062_13620 | Not Available | Negative | 2950504 - 2951034 | 18966.7 |
| phenylacetic acid degradation protein | AO062_13625 | Not Available | Negative | 2951028 - 2951807 | 28720.2 |
| phenylacetate-coa oxygenase | AO062_13630 | Not Available | Negative | 2951822 - 2952118 | 11367.5 |
| phenylacetate-coa oxygenase | AO062_13635 | Not Available | Negative | 2952115 - 2953125 | 38163.3 |
| phenylacetate--coa ligase | AO062_13640 | Not Available | Negative | 2953167 - 2954477 | 48286.6 |
| phenylacetic acid degradation protein | AO062_13645 | Not Available | Negative | 2954492 - 2954938 | 15920.9 |
| enoyl-coa hydratase | AO062_13650 | Not Available | Negative | 2954940 - 2955743 | 27317.0 |
| phenylacetic acid degradation protein paay | AO062_13655 | Not Available | Positive | 2956056 - 2956658 | 21225.6 |
| tetr family transcriptional regulator | AO062_13660 | Not Available | Positive | 2956730 - 2957365 | 23251.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
