Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_13565 | Not Available | Positive | 2939320 - 2939796 | 17456.5 |
| flavin reductase | AO062_13570 | Not Available | Positive | 2939886 - 2940494 | 22026.2 |
| hypothetical protein | AO062_13575 | Not Available | Positive | 2940500 - 2940919 | 14600.4 |
| isoprenylcysteine carboxyl methyltransferase | AO062_13580 | Not Available | Negative | 2940900 - 2941460 | 21357.6 |
| 2-deoxy-d-gluconate 3-dehydrogenase | AO062_13585 | Not Available | Negative | 2941490 - 2942248 | 25760.8 |
| enoyl-coa hydratase | AO062_13590 | Not Available | Negative | 2942248 - 2944308 | 72529.8 |
| metal-dependent hydrolase | AO062_13595 | Not Available | Negative | 2944367 - 2945098 | 26831.0 |
| hypothetical protein | AO062_13600 | Not Available | Negative | 2945095 - 2946993 | 66400.0 |
| abc transporter permease | AO062_13605 | Not Available | Negative | 2946990 - 2948018 | 36284.5 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_13610 | Not Available | Negative | 2948207 - 2949352 | 40025.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
