Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | AO062_13360 | Not Available | Positive | 2890634 - 2890948 | 11199.7 |
| hypothetical protein | AO062_13365 | Not Available | Negative | 2891114 - 2891452 | 12274.7 |
| acetylornithine aminotransferase | AO062_13370 | Not Available | Positive | 2891613 - 2892824 | 42965.3 |
| ornithine carbamoyltransferase | AO062_13375 | Not Available | Positive | 2892821 - 2893756 | 34927.6 |
| hypothetical protein | AO062_13380 | Not Available | Positive | 2893791 - 2894351 | 20730.1 |
| fe-s oxidoreductase | AO062_13385 | Not Available | Positive | 2894348 - 2894665 | 11350.5 |
| asnc family transcriptional regulator | AO062_13390 | Not Available | Negative | 2894794 - 2895270 | 17400.1 |
| kynurenine formamidase | AO062_13395 | Not Available | Positive | 2895447 - 2896091 | 23118.8 |
| kynureninase | AO062_13400 | Not Available | Positive | 2896105 - 2897385 | 45840.8 |
| tryptophan 2,3-dioxygenase | AO062_13405 | Not Available | Positive | 2897382 - 2898242 | 32899.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
