Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | AO062_01295 | Not Available | Positive | 267802 - 268308 | 18781.0 |
| anti-sigma factor | AO062_01300 | Not Available | Positive | 268325 - 269149 | 29663.2 |
| atp-binding protein | AO062_01305 | Not Available | Positive | 269227 - 269622 | 13527.1 |
| hypothetical protein | AO062_01310 | Not Available | Positive | 269722 - 270399 | 23968.3 |
| permease | AO062_01315 | Not Available | Negative | 270414 - 271331 | 31829.1 |
| gtp-binding protein | AO062_01320 | Not Available | Negative | 271351 - 273186 | 67221.8 |
| trna pseudouridine synthase b | AO062_01325 | Not Available | Negative | 273183 - 274139 | 34140.0 |
| ribosome-binding factor a | AO062_01330 | Not Available | Negative | 274142 - 274513 | 13673.5 |
| translation initiation factor if-2 | AO062_01335 | Not Available | Negative | 274535 - 277522 | 105826.0 |
| transcription elongation factor nusa | AO062_01340 | Not Available | Negative | 277546 - 279030 | 54881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
