Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | AO062_13160 | Not Available | Negative | 2852641 - 2853627 | 35517.7 |
| indolepyruvate oxidoreductase subunit b | AO062_13165 | Not Available | Negative | 2853641 - 2855146 | 54734.9 |
| indolepyruvate ferredoxin oxidoreductase | AO062_13170 | Not Available | Negative | 2855151 - 2857343 | 78676.4 |
| marr family transcriptional regulator | AO062_13175 | Not Available | Positive | 2857488 - 2857964 | 17980.6 |
| alcohol dehydrogenase | AO062_13180 | Not Available | Negative | 2857979 - 2858857 | 30684.1 |
| alpha/beta hydrolase | AO062_13185 | Not Available | Negative | 2858854 - 2859657 | 28975.7 |
| 3-hydroxybutyryl-coa dehydrogenase | AO062_13190 | Not Available | Negative | 2859654 - 2860658 | 35905.1 |
| glycerol-3-phosphate dehydrogenase | AO062_13195 | Not Available | Negative | 2860648 - 2861721 | 38337.9 |
| dead/deah box helicase | AO062_13200 | Not Available | Negative | 2861939 - 2863846 | 68076.7 |
| oligoribonuclease | AO062_13205 | Not Available | Negative | 2864095 - 2864691 | 22154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
