Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | AO062_13110 | Not Available | Negative | 2840274 - 2841416 | 39515.7 |
| penicillin amidase | AO062_13115 | Not Available | Negative | 2841460 - 2843916 | 88361.5 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_13120 | Not Available | Negative | 2843954 - 2845120 | 40893.4 |
| short-chain dehydrogenase | AO062_13125 | Not Available | Negative | 2845192 - 2845926 | 25435.9 |
| cyclase | AO062_13130 | Not Available | Negative | 2845923 - 2846738 | 29801.3 |
| short-chain dehydrogenase | AO062_13135 | Not Available | Negative | 2846755 - 2848008 | 45270.6 |
| acetyl-coa acetyltransferase | AO062_13140 | Not Available | Negative | 2848005 - 2849177 | 41633.5 |
| amp-binding protein | AO062_13145 | Not Available | Negative | 2849174 - 2850799 | 58226.3 |
| phenylpropionate dioxygenase | AO062_13150 | Not Available | Negative | 2850807 - 2851295 | 18964.4 |
| oxidoreductase | AO062_13155 | Not Available | Negative | 2851295 - 2852608 | 49766.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
