Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hxlr family transcriptional regulator | AO062_12895 | Not Available | Positive | 2805058 - 2805411 | 13171.0 |
| osmotically inducible protein osmc | AO062_12900 | Not Available | Negative | 2805425 - 2805826 | 14579.4 |
| gcn5 family acetyltransferase | AO062_12905 | Not Available | Negative | 2805858 - 2806322 | 16993.9 |
| asnc family transcriptional regulator | AO062_12910 | Not Available | Negative | 2806334 - 2806801 | 17487.5 |
| amino acid dehydrogenase | AO062_12915 | Not Available | Positive | 2806930 - 2808231 | 46882.3 |
| hypothetical protein | AO062_12920 | Not Available | Negative | 2808275 - 2808625 | 12470.5 |
| metal abc transporter substrate-binding protein | AO062_12925 | Not Available | Negative | 2808654 - 2809478 | 29720.0 |
| methionine abc transporter atp-binding protein | AO062_12930 | Not Available | Negative | 2809519 - 2810181 | 23584.7 |
| abc transporter atp-binding protein | AO062_12935 | Not Available | Negative | 2810174 - 2811043 | 31949.6 |
| dioxygenase | AO062_12940 | Not Available | Positive | 2811279 - 2812103 | 29444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
