Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | AO062_12415 | Not Available | Negative | 2688577 - 2689380 | 26737.5 |
| tetr family transcriptional regulator | AO062_12420 | Not Available | Positive | 2689583 - 2690260 | 25246.1 |
| luciferase | AO062_12425 | Not Available | Positive | 2690268 - 2691230 | 34809.9 |
| glutathione s-transferase | AO062_12430 | Not Available | Positive | 2691285 - 2691989 | 26128.6 |
| glutamate carboxypeptidase | AO062_12435 | Not Available | Negative | 2692007 - 2693257 | 43933.1 |
| cyclic peptide transporter | AO062_12440 | Not Available | Negative | 2693332 - 2695011 | 60793.5 |
| hypothetical protein | AO062_12445 | Not Available | Negative | 2695097 - 2695330 | 8531.08 |
| siderophore biosynthesis protein | AO062_12460 | Not Available | Positive | 2696282 - 2697388 | 41908.6 |
| ornithine monooxygenase | AO062_12465 | Not Available | Positive | 2697375 - 2698694 | 49082.2 |
| rna polymerase subunit sigma-24 | AO062_12470 | Not Available | Positive | 2698856 - 2699434 | 21903.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
