Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | AO062_12365 | Not Available | Negative | 2676431 - 2677822 | 49479.4 |
| phosphoglucomutase | AO062_12370 | Not Available | Negative | 2677830 - 2679212 | 48752.5 |
| adenosine deaminase | AO062_12375 | Not Available | Positive | 2679323 - 2680927 | 57004.2 |
| cysteine methyltransferase | AO062_12380 | Not Available | Positive | 2680924 - 2681421 | 17726.0 |
| hypothetical protein | AO062_12385 | Not Available | Positive | 2681498 - 2682460 | 33274.7 |
| hypothetical protein | AO062_12390 | Not Available | Negative | 2682467 - 2683120 | 23764.0 |
| hypothetical protein | AO062_12395 | Not Available | Positive | 2683307 - 2684146 | 29733.3 |
| amp-dependent synthetase | AO062_12400 | Not Available | Positive | 2684262 - 2685869 | 58011.2 |
| amp-dependent acyl-coa synthetase | AO062_12405 | Not Available | Negative | 2685871 - 2687415 | 55479.3 |
| saccharopine dehydrogenase | AO062_12410 | Not Available | Negative | 2687421 - 2688554 | 40262.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
