Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein motb | AO062_12315 | Not Available | Negative | 2667066 - 2668280 | 43704.0 |
| hypothetical protein | AO062_12320 | Not Available | Negative | 2668280 - 2668621 | 11818.3 |
| transporter | AO062_12325 | Not Available | Negative | 2668797 - 2669747 | 33491.5 |
| ligand-gated channel protein | AO062_12330 | Not Available | Negative | 2669791 - 2671887 | 74924.6 |
| hypothetical protein | AO062_12335 | Not Available | Negative | 2671971 - 2672333 | 12619.3 |
| peptide methionine sulfoxide reductase | AO062_12340 | Not Available | Negative | 2672386 - 2672937 | 20146.4 |
| tetr family transcriptional regulator | AO062_12345 | Not Available | Positive | 2673041 - 2673718 | 25309.8 |
| protein-l-isoaspartate o-methyltransferase | AO062_12350 | Not Available | Positive | 2673813 - 2674490 | 24815.9 |
| sulfurtransferase | AO062_12355 | Not Available | Positive | 2674507 - 2674860 | 12478.7 |
| channel protein tolc | AO062_12360 | Not Available | Positive | 2674885 - 2676414 | 53384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
