Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase i | AO062_12265 | Not Available | Positive | 2659416 - 2659829 | 14851.6 |
| pyridoxamine 5-phosphate oxidase | AO062_12270 | Not Available | Positive | 2659891 - 2660424 | 19585.6 |
| haloacid dehalogenase | AO062_12275 | Not Available | Negative | 2660429 - 2661157 | 26366.6 |
| keto-deoxy-phosphogluconate aldolase | AO062_12280 | Not Available | Negative | 2661160 - 2661795 | 21885.6 |
| phosphogluconate dehydratase | AO062_12285 | Not Available | Negative | 2661838 - 2663667 | 64287.4 |
| hypothetical protein | AO062_12290 | Not Available | Negative | 2663867 - 2664418 | 18594.3 |
| calcium transporter chac | AO062_12295 | Not Available | Positive | 2664554 - 2665249 | 25621.5 |
| superoxide dismutase | AO062_12300 | Not Available | Positive | 2665246 - 2665785 | 17983.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | AO062_12305 | Not Available | Negative | 2665803 - 2666372 | 19353.2 |
| pyridoxamine 5'-phosphate oxidase | AO062_12310 | Not Available | Positive | 2666402 - 2667058 | 25007.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
