Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | AO062_12215 | Not Available | Negative | 2646938 - 2648362 | 49161.6 |
| mfs transporter | AO062_12220 | Not Available | Negative | 2648378 - 2649694 | 46589.0 |
| marr family transcriptional regulator | AO062_12225 | Not Available | Negative | 2649807 - 2650262 | 16629.1 |
| aromatic compound catabolic protein | AO062_12230 | Not Available | Positive | 2650338 - 2650904 | 19974.2 |
| hypothetical protein | AO062_12235 | Not Available | Positive | 2651133 - 2653688 | 87737.3 |
| iron abc transporter substrate-binding protein | AO062_12240 | Not Available | Positive | 2653844 - 2654905 | 37628.1 |
| iron abc transporter permease | AO062_12245 | Not Available | Positive | 2654941 - 2656626 | 58822.1 |
| abc transporter | AO062_12250 | Not Available | Positive | 2656623 - 2657306 | 24371.5 |
| hypothetical protein | AO062_12255 | Not Available | Positive | 2657321 - 2658577 | 45193.9 |
| glutathione s-transferase | AO062_12260 | Not Available | Positive | 2658679 - 2659359 | 25320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
