Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO062_12165 | Not Available | Negative | 2637440 - 2638450 | 36513.0 |
| l-dehydroascorbate transporter large permease subunit | AO062_12170 | Not Available | Negative | 2638512 - 2639813 | 45617.1 |
| abc transporter permease | AO062_12175 | Not Available | Negative | 2639810 - 2640355 | 20526.8 |
| gntr family transcriptional regulator | AO062_12180 | Not Available | Negative | 2640416 - 2641165 | 27100.8 |
| dihydroxy-acid dehydratase | AO062_12185 | Not Available | Positive | 2641381 - 2643120 | 62996.1 |
| 2-dehydro-3-deoxygalactonokinase | AO062_12190 | Not Available | Positive | 2643416 - 2644327 | 32254.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | AO062_12195 | Not Available | Positive | 2644324 - 2644965 | 21584.4 |
| hypothetical protein | AO062_12200 | Not Available | Positive | 2645010 - 2645747 | 26725.0 |
| hypothetical protein | AO062_12205 | Not Available | Positive | 2645861 - 2646187 | 12346.4 |
| short-chain dehydrogenase | AO062_12210 | Not Available | Negative | 2646194 - 2646901 | 23925.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
