Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | AO062_12015 | Not Available | Positive | 2609003 - 2609776 | 26878.2 |
| hypothetical protein | AO062_12020 | Not Available | Positive | 2609821 - 2610894 | 39222.6 |
| mfs transporter | AO062_12025 | Not Available | Positive | 2610941 - 2612278 | 47092.6 |
| gntr family transcriptional regulator | AO062_12030 | Not Available | Positive | 2612367 - 2613125 | 27384.9 |
| amino acid abc transporter substrate-binding protein | AO062_12035 | Not Available | Positive | 2613122 - 2613919 | 28087.1 |
| polar amino acid abc transporter permease | AO062_12040 | Not Available | Positive | 2613935 - 2614597 | 23643.6 |
| amino acid abc transporter permease | AO062_12045 | Not Available | Positive | 2614616 - 2615269 | 23469.4 |
| amino acid abc transporter atp-binding protein | AO062_12050 | Not Available | Positive | 2615253 - 2616038 | 28377.9 |
| hypothetical protein | AO062_12055 | Not Available | Negative | 2616067 - 2616384 | 11493.9 |
| isopentenyl-diphosphate delta-isomerase | AO062_12060 | Not Available | Negative | 2616786 - 2617331 | 20614.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
