Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | AO062_11915 | Not Available | Positive | 2590174 - 2591040 | 31419.1 |
| short-chain dehydrogenase | AO062_11920 | Not Available | Positive | 2591063 - 2591830 | 25695.8 |
| nadph:quinone reductase | AO062_11925 | Not Available | Positive | 2591827 - 2592735 | 32766.7 |
| oxidoreductase | AO062_11930 | Not Available | Positive | 2592732 - 2593727 | 34628.4 |
| hypothetical protein | AO062_11935 | Not Available | Positive | 2593746 - 2594102 | 13098.8 |
| laci family transcriptional regulator | AO062_11940 | Not Available | Positive | 2594165 - 2595154 | 34103.3 |
| hypothetical protein | AO062_11945 | Not Available | Negative | 2595157 - 2595519 | 12214.4 |
| peptidase | AO062_11950 | Not Available | Negative | 2595516 - 2597141 | 58540.0 |
| hypothetical protein | AO062_11955 | Not Available | Negative | 2597138 - 2597440 | 9782.1 |
| porin | AO062_11960 | Not Available | Negative | 2597532 - 2600012 | 88688.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
