Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate aminotransferase | AO062_11865 | Not Available | Positive | 2579365 - 2580398 | 35997.9 |
| succinate-semialdehyde dehydrogenase | AO062_11870 | Not Available | Positive | 2580410 - 2581873 | 51171.6 |
| hypothetical protein | AO062_11875 | Not Available | Positive | 2581887 - 2582267 | 13854.6 |
| methyltransferase | AO062_11880 | Not Available | Negative | 2582271 - 2583269 | 36303.4 |
| sulfatase maturase | AO062_11885 | Not Available | Negative | 2583296 - 2584561 | 46469.9 |
| pyridine nucleotide-disulfide oxidoreductase | AO062_11890 | Not Available | Positive | 2584700 - 2586046 | 47529.1 |
| hypothetical protein | AO062_11895 | Not Available | Positive | 2586066 - 2586317 | 9656.16 |
| tat pathway signal protein | AO062_11900 | Not Available | Negative | 2586357 - 2588282 | 69147.3 |
| nuclease | AO062_11905 | Not Available | Negative | 2588343 - 2588915 | 21283.2 |
| laci family transcriptional regulator | AO062_11910 | Not Available | Negative | 2589012 - 2590043 | 36548.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
