Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m23 | AO062_11560 | Not Available | Positive | 2523746 - 2524651 | 31810.5 |
| hypothetical protein | AO062_11565 | Not Available | Positive | 2524674 - 2525003 | 12116.3 |
| succinylglutamate desuccinylase | AO062_11570 | Not Available | Negative | 2525019 - 2525954 | 34049.6 |
| ammonium transporter | AO062_11575 | Not Available | Negative | 2526068 - 2527270 | 42162.9 |
| lyttr family transcriptional regulator | AO062_11580 | Not Available | Negative | 2527444 - 2528415 | 35972.6 |
| hypothetical protein | AO062_11585 | Not Available | Positive | 2528572 - 2529837 | 47353.7 |
| phenylacetic acid degradation protein | AO062_11590 | Not Available | Negative | 2529755 - 2530201 | 15691.8 |
| hypothetical protein | AO062_11595 | Not Available | Positive | 2530439 - 2532067 | 58309.1 |
| tonb-dependent receptor | AO062_11600 | Not Available | Negative | 2532218 - 2534407 | 79771.9 |
| abc transporter permease | AO062_11605 | Not Available | Negative | 2534439 - 2535908 | 52983.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
