Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | AO062_11510 | Not Available | Negative | 2513886 - 2515574 | 57364.7 |
| hypothetical protein | AO062_11515 | Not Available | Positive | 2515863 - 2516384 | 18357.3 |
| fatty acid hydroxylase | AO062_11520 | Not Available | Positive | 2516426 - 2517391 | 37022.1 |
| hypothetical protein | AO062_11525 | Not Available | Positive | 2517388 - 2517693 | 11023.4 |
| histidine kinase | AO062_11530 | Not Available | Positive | 2517765 - 2518784 | 36631.6 |
| lytr family transcriptional regulator | AO062_11535 | Not Available | Positive | 2518811 - 2519650 | 30459.9 |
| hypothetical protein | AO062_11540 | Not Available | Negative | 2519732 - 2520091 | 12696.0 |
| glutamine--trna ligase | AO062_11545 | Not Available | Positive | 2520229 - 2522046 | 67754.8 |
| hypothetical protein | AO062_11550 | Not Available | Positive | 2522186 - 2523151 | 36038.7 |
| pseudouridine synthase | AO062_11555 | Not Available | Positive | 2523148 - 2523708 | 20903.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
